Description of loxocythere (novoloxocythere) pelius subgen. sp. nov. (ostracoda) from the cenozoic of S.E. Australia with comments on species of antarctiloxoconcha hartmann, 1986 and loxoreticulatum benson, 1964 from Australian and Antarctic marine waters

Loxocythere (Novoloxocythere) pelius subgen. et sp. nov. is described from Upper Miocene strata of the Port Phillip and Western Port Basins. Victoria. It has its acme in shallow open marine facies of latest Miocene (Cheltenhamian) age. This species, along with Loxocythere (Novoloxocythere) kerryswansoni Yassini and Jones, 1995, forms a discrete group of rotund Australian Loxocythere species that possess posterior extremities in both valves that are positioned well above mid carapace height (i.e. adjacent to dorsal margin). This feature along with a sub-triangular inner margin outline, defines a carapace shape that is distinct from that of rotund species of Loxocythere (loxocythere) Hornibrook, 1952 and Antarctiloxoconcha Hartmann, 1986. The type species of Antarctiloxoconcha – A.frigida (Neale. 1967), possesses internal carapace features that are very similar to the type species of Loxocythere - L. crassa Hornibrook, 1952. Both have relatively short carapaces and sub-quadrate inner margin outlines with posterior extremities in both valves positioned below mid carapace height. Species of Loxocythere (Novoloxocythere), in particular L. (N.) kerryswansoni, have a carapace shape that is transitional between Loxocythere and Loxoreticulatum Benson, 1964. Species of Loxoreticulatum generally possess a sub-parallelogram shaped carapace/inner margin and arched median hinge element. The latter feature is distinct from the mostly straight median hinge elements of Loxocythere (Loxocythere) and Loxocythere (Novoloxocythere) species. Species of Loxocythere (Novoloxocythere) are also readily distinguishable from relatively elongate species of Loxocythere, such as L. (L.) hornibrooki McKenzie, 1967, as the latter possess long (for genus), sub-rectangular shaped carapaces/inner margin outlines and posterior extremities below mid height.

Isolation of a novel Orientia species (O. chuto sp. nov.) from a patient infected in Dubai

In July 2006, an Australian tourist returning from Dubai, in the United Arab Emirates (UAE), developed acute scrub typhus. Her signs and symptoms included fever, myalgia, headache, rash, and eschar. Orientia tsutsugamushi serology demonstrated a 4-fold rise in antibody titers in paired serum collections (1:512 to 1:8,192), with the sera reacting strongest against the Gilliam strain antigen. An Orientia species was isolated by the in vitro culture of the patient's acute blood taken prior to antibiotic treatment. The gene sequencing of the 16S rRNA gene (rrs), partial 56-kDa gene, and the full open reading frame 47-kDa gene was performed, and comparisons of this new Orientia sp. isolate to previously characterized strains demonstrated significant sequence diversity. The closest homology to the rrs sequence of the new Orientia sp. isolate was with three strains of O. tsutsugamushi (Ikeda, Kato, and Karp), with a nucleotide sequence similarity of 98.5%. The closest homology to the 47-kDa gene sequence was with O. tsutsugamushi strain Gilliam, with a nucleotide similarity of 82.3%, while the closest homology to the 56-kDa gene sequence was with O. tsutsugamushi strain TA686, with a nucleotide similarity of 53.1%. The molecular divergence and geographically unique origin lead us to believe that this organism should be considered a novel species. Therefore, we have proposed the name “Orientia chuto,” and the prototype strain of this species is strain Dubai, named after the location in which the patient was infected.

Sphingobacterium pakistanensis sp. nov., a novel plant growth promoting rhizobacteria isolated from rhizosphere of Vigna mungo

The taxonomic status of a bacterium, strain NCCP-246(T), isolated from rhizosphere of Vigna mungo, was determined using a polyphasic taxonomic approach. The strain NCCP-246(T) can grow at 16-37 °C (optimum 32 °C), at pH ranges of 6-8 (optimum growth occurs at pH 7) and in 0-4 % (w/v) NaCl. Phylogenetic analysis based upon on 16S rRNA gene sequence comparison revealed that strain NCCP-246(T) belonged to genus Sphingobacterium. Strain NCCP-246(T) showed highest similarity to the type strain of Sphingobacterium canadense CR11(T) (97.67 %) and less than 97 % with other species of the genus. The DNA-DNA relatedness value of strain NCCP-246(T) with S. canadense CR11(T) and Sphingobacterium thalpophilum JCM 21153(T) was 55 and 44.4 %, respectively. The chemotaxonomic data revealed the major menaquinone as MK-7 and dominant cellular fatty acids were summed feature 3 [C16:1 ω7c/C16:1 ω6c] (37.07 %), iso-C15:0 (28.03 %), C16:0 (11.85 %), C17:0 cyclo (8.84 %) and C14:0 (2.42 %). The G+C content of the strain was 39.2 mol%. On the basis of DNA-DNA hybridization, phylogenetic analyses, physiological and, biochemical data, strain NCCP-246(T) can be differentiated from the validly named members of genus Sphingobacterium and thus represents as a new species, for which the name, Sphingobacterium pakistanensis sp. nov. is proposed with the type strain NCCP-246(T) (= JCM18974 (T) = KCTC 23914(T)).

Streptomyces caldifontis sp. nov., isolated from a hot water spring of Tatta Pani, Kotli, Pakistan

A Gram-staining positive, non-motile, rod-shaped, catalase positive and oxidase negative bacterium, designated NCCP-1331(T), was isolated from a hot water spring soil collected from Tatta Pani, Kotli, Azad Jammu and Kashmir, Pakistan. The isolate grew at a temperature range of 18-40 °C (optimum 30 °C), pH 6.0-9.0 (optimum 7.0) and with 0-6 % NaCl (optimum 2 % NaCl (w/v)). The phylogenetic analysis based on 16S rRNA gene sequence revealed that strain NCCP-1331(T) belonged to the genus Streptomyces and is closely related to Streptomyces brevispora BK160(T) with 97.9 % nucleotide similarity, followed by Streptomyces drosdowiczii NRRL B-24297(T) with 97.8 % nucleotide similarity. The DNA-DNA relatedness values of strain NCCP-1331(T) with S. brevispora KACC 21093(T) and S. drosdowiczii CBMAI 0498(T) were 42.7 and 34.7 %, respectively. LL-DAP was detected as diagnostic amino acid along with alanine, glycine, leucine and glutamic acid. The isolate contained MK-9(H8) as the predominant menaquinone. Major polar lipids detected in NCCP-1331(T) were phosphatidylethanolamine, phosphatidylinositol and unidentified phospholipids. Major fatty acids were iso-C16: 0, summed feature 8 (18:1 ω7c/18:1 ω6c), anteiso-C15:0 and C16:0. The genomic DNA G + C content was 69.8 mol %. On the basis of phylogenetic, phenotypic and chemotaxonomic analysis, it is concluded that strain NCCP-1331(T) represents a novel species of the genus Streptomyces, for which the name Streptomyces caldifontis sp. nov. is proposed. The type strain is NCCP-1331(T) (=KCTC 39537(T) = CPCC 204147(T)).

Middle permian brachiopods from central Peninsular Malaysia - faunal affinities between Malaysia and west Cambodia

A moderately diverse Permian brachiopod fauna is described from a new rock unit, the Bera Formation, in the Bera District, central Pahang, Peninsular Malaysia. The fauna consists of 19 taxa, including 14 genera and 17 (both identified and unidentified) typically Tethyan species. The fauna appears to be correlative on the basis of brachiopods with the Neoschwagerina-Yabeina fusulinid Zones in Indochina and South China. In particular, it has strong linkage to Member C (Yabeina beds) of the Sisophon Limestone, west Cambodia. This is indicated by three of the Bera species — Urushtenoidea chaoi (Ching), Spyridiophora gubleri Termier and Termier, and Transennatia termierorum sp. nov., being shared with the Cambodian fauna. A possible early Capitanian (Middle Permian) age is proposed for the Bera brachiopod fauna.

New Strophalosiidae (Brachiopoda) from the early Permian of Argentina

New representatives of the family Strophalosiidae (Brachiopoda) are described from the Tupe Formation of the Paganzo Basin, Argentina. The genus Coronalosia Waterhouse & Gupta is reviewed and the new taxa Coronalosia argentinensis sp. nov. and Tupelosia paganzoensis gen. et sp. nov. proposed. The age of the Tupe Formation is reviewed and a middle to late Asselian (Early Permian) age is preferred.
The new genus Guadalupelosia from the mid-Permian of West Texas, USA, is also proposed.

Calescharidae, a new family for the Tertiary to Recent Genera Caleschara MacGillivray and Tretosina Canu and Bassler (Bryozoa: Cheilostomata)

A new family of Cheilostomata, the Calescharidae, is introduced for the genus Caleschara MacGillivray and its Recent Australian typespecies, C. denticulata(MacGillivray), which is redefined from type and other material. The Australian Tertiary genus Tretosina Canu & Bassler and its type species,T. arcifera Canu & Bassler, are closely related,and are also assigned to the Calescharidae. The history and significance of family attributions of both genera are outlined, and RecentC. denticulata from Australian and other localities is distinguished from the Late Tertiary Victorian species C. parva Maplestone. Caleschara lithconis, sp. nov., from the Late Eocene of Victoria is one of the earliest known species: its morphology closely resembles a Recent form from the Philippines, C. junctifera Canu & Bassler. Another Recent species, Caleschara minuta (Maplestone) from the GilbertIslands, is a senior synonym of three other Indo-Pacific species,C. levinseni Harmer, C. laxa Canu & Bassler and Floridinella arculifera Canu & Bassler, and resembles the European Paleocene C. squamosa. Three other related species are briefly discussed. Close relationships to other families are problematic and are discussed; divergence in the early history of the cheilostomes is inferred.

First fossil finds of some Australian Bryozoa (Cheilostomata)

The abundant fossil record of well-preserved Bryozoa in samples from the Tertiary of Victoria and South Australia includes some 'first fossil finds' which are recorded here. Several are of species known from the Recent of the Australian or Indo-West-Pacific regions, but some represent genera with a much wider temporal and geographical range. Of the 11 species illustrated, six are known, or may be inferred, to have inhabited 'sand fauna' environments. Specimens of one species are complete enough to allow its formal description as Chlidoniopsis inopina sp. nov.

Global distribution of permian conulariids and palaeobiogeographical implications

Previously, minimal work has been carried out on conulariids due to their rare occurrences and resultant biostratigraphical limitations. The palaeobiogeographical distribution of Permian conulariids suggests that they have a marked preference for cold to cool-water regions, that they are significant indicators for migration patterns, and that they can potentially provide information on the palaeogeographical configuration and movement of terranes. Permian conulariids are found in Australia, India, New Zealand, Pakistan, Iran, Afghanistan, Kashmir, China, Japan, Russia, Germany, Canada, United States of America, and Bolivia. The diversity of Permian conulariids is markedly higher in the polar regions than in the palaeoequatorial region.

Permian conulariid genera include Notoconularia Thomas 1969, Gondaconularia Waterhouse 1986, Cheliconularia Waterhouse 1986, Neoconularia Sugiyama 1942, Calloconularia Sinclair 1952, Diconularia Sinclair 1952, Paraconularia Sinclair 1940, Mesoconularia Boucek 1939 and Conularia Sowerby 1821. This paper describes two new species of conulariids: Diconularia meadepeakensis sp. nov. from the Phosphoria Formation (Guadalupian), Idaho, USA and Paraconularia kazanensis sp. nov. from the Sokian Horizon (?Roadian), Volga Region, Russia.

A review of Australian Conescharellinidae (Bryozoa : Cheilostomata)

The family Conescharellinidae Levinsen is defined and is regarded as comprising seven cheilostome genera (Conescharellina, Bipora, Trochosodon, Flabellopora, Zeuglopora, Crucescharellina and Ptoboroa). The astogeny of colonies, that consists of frontally budded zooids with "reversed" orientation, is briefly described and compared between genera. The morphology of zooids and heterozooids is defined and keys to genera and Australian species are provided. Taxa that were first described from Australia or from reliable subsequent records are redescribed and illustrated where possible. Australian specimens that have been identified as non-Australian species, have generally been found to be distinct and are here redescribed as new species. Some non-Australian records of specimens previously assigned to Australian species have also been re-examined. These are described and sometimes referred to other taxa. Altogether, eight previously described species that have not been found in the present material are discussed and 27 taxa are described from collections, principally from the eastern and southern coasts of Australia and from the Tertiary of Victoria. Eighteen of these are considered to be new species. Where possible, type or at least topotype material of previously described species has been examined. Colonies from the collections of Museum Victoria (NMV) and the Natural History Museum, London (BMNH), have been examined. New species from Australia described here are: Conescharellina cognata, C. ecstasis, C. diffusa, C. obscura, C. stellata, C. plana, C. perculta, C. pustulosa, C. ocellata, C. macgillivrayi, C. humerus; Trochosodon fecundus, T. asymmetricus, T. diommatus, T. aster, T. anomalus, T. praecox and Crucescharellina australis. In addition, the New Zealand bryozoan Trochosodon multiarmatus (Gordon, 1989) (not Bipora multiarmata Maplestone, 1909) is described as Trochosodon gordoni sp. nov.

New lopingian (late permian) rugosochonetid species from Sichuan, South China

Two rugosochonetid species, Neochonetes (Huangichonetes) geniculatus sp. nov. and Neochonetes (Zhongyingia) linshuiensis sp. nov., are described from the Lopingian (Late Permian) of the Chuanmu section, Sichuan, South China. Ecological changes from the diverse upper Changhsingian brachiopod palaeocommunity to the depauperate post-extinction brachiopod community are briefly discussed.

The linshuichonetes-Crurithyris community and new productid species from the Cisuralian (Early Permian) of Sichuan, China

Two marginiferinid species, Marginifera spinulifera sp. nov. and Transennatia sulcata sp. nov. are described from the Early Permian Liangshan and lowermost Chihsia formations at the Chuanmu Section, Sichuan, China. The Linshuichonetes – Crurithyris Community is discussed in the context of a pioneering opportunistic community that developed at the onset of the Yanghsingian transgression in the late Artinskian. This community was characterized by species that were generally small and relatively thin-shelled, and showed other features that are ecological adaptations to fluctuating environmental conditions.

New species of Otionellina and Selenaria (Bryozoa-Cheilostomata) from the South West Shelf, Western Australia

Recent sediment samples recovered from the mid-latitude South West Shelf (SWS) of Western Australia (23°- 32° S) by a scientific team aboard the RV Franklin have produced large numbers of free-living, lunulitiform bryozoans. Among these are three undescribed species, Otionellina boneae sp. nov., Selenaria kayae sp. nov., and Selenaria meganae sp. nov. The Australasian lunulite fauna is both diverse and abundant and the new species bring the total of described taxa to sixty (P. Cook unpub.). Twelve lunulite species have been recorded from the SWS. These findings have extended the known geographical range of several lunulite species.

Notes on astogeny of some Petraliellidae (Bryozoa) from Australia

Members of the bryozoan family Petraliellidae share the capacity to develop basal rhizoids, which anchor the unilaminar, semi-repent parts of the colonies above the substratum, and enable them to overgrow other, competing sessile forms. Little is known of the larval behaviour and settlement, or the early astogeny of species. Ancestrulate colonies of the Australian Tertiary lunulitiform species Smittia biincisa are referred to the genus Riscodopa , and together with Riscodopa paucipora sp. nov. are described and compared with the Recent species R. cotyla and R. parva from New Zealand, and with R. hyalina sp. nov. from New South Wales, Australia. All the Recent species are known to develop basal rhizoids, and an early astogeny similar to that of many other small, rooted bryozoans, comprising the post-metamorphosis development of a binary complex, including rhizoid and feeding elements, is inferred for Riscodopa . Observations on living Hippopetraliella magna from Queensland suggest that both the ancestrular morphology and early astogeny show a capacity for semi-repent growth, even though they do not include rhizoid development. Larvae metamorphose without direct attachment, and the ancestrula develops elongated, partially calcified supporting processes, which raise the early stages of growth above the substratum. A similar kind of ancestrula has been found in preserved specimens of Mucropetraliella ellerii .